Nifty
Variant
Variant COMBO
Acceptor
Donor
Config
Specifications
Recommendations
Version 0.0.43
Variant NIF Calculator
Input
Variant (HGVS)
Cryptics
BP Window Option
3 x 5nt
4 x 6nt
PPT Window Option
6 x 7nt
6 x 8nt
Examples
NM_018161.5:c.1765-7T>A
e2e test #1 - intronic acceptor
NM_001204.7:c.248-3T>C
e2e test #2 - intronic acceptor
NM_000495.5:c.2245-40A>G
e2e test #3 - intronic acceptor
NM_000487.6:c.465+1G>A
intronic donor
NM_000487.6:c.100C>T
sample error
+1, +2, +3
example cryptics #1
-1, -2, -3
example cryptics #2
-1, +2, -3, +4
example cryptics #3